It would save me a lot of time if I could have the ability to also import a single table at a time. We are in a transition stage where we are not using the toolkit to deploy structures yet but I am building all the relations etc... so I find myself having to manually duplicate all new tables which can lead to many typo's and incorrect setting.

I guess I am somewhat confused by this post because you can import a single table at a time:

This is also covered in the documentation:

Databases -> Importing Databases -> Importing from SQL Server

I appologize, I totally missed this. When I originally imported my database I was sure I could only do the entire database.  Was this a recent addition? 

I use this import a lot, the only thing I notice is that it will create a new Database in the DDT, so I always copy the table to the proper database and delete the new created one.

No this is not recent, it has been there since our very first release of the DDT.  Glad you found it though.